scientific
Geneformer
Transformer pre-trained on human single-cell transcriptomes for predictions in network biology where data are limited, such as in silico perturbation and cell classification.
Levelmodel
Classscientific
Parametersnot in the notes
Contextnot in the notes
Released12 Mar 2022
Opennessopen weights permissive
Runs onnot in the notes
Statusactive
Identity
- Developer
- not in the notes
- Family
- not in the notes
- Released
- 12 Mar 2022 sourcesregistry date
- Weights published
- –
- Record checked
- 12 Oct 2026
Where this comes from
Developer and dates from the research notes. Release date is the vendor's public announcement; weights date is when open weights were published.
Architecture and Size
- Architecture
- dense transformer Encoder pre-trained on single-cell transcriptomes (fill-mask)
- Total parameters
- – sources
- Active parameters
- –
- Checkpoint parameters
- –
- Note
- Original model trained on about 30 million transcriptomes; expanded model on about 104 million (model card). NVIDIA BioNeMo publishes 10M and 100M builds.
- Context length
- not in the notes
- Input
- molecule
- Output
- molecule
Where this comes from
Parameter counts as the developer states them. Where the checkpoint holds a different total, both are shown (register A16).
Openness and Access
- Openness
- open weights permissive
- Licence
- Apache License 2.0 sources
- Access routes
- open weights download
Where this comes from
The licence file governs over registry tags and aggregator labels.
Deployment
- Runs on
- not in the notes
- Footprint
- not in the notes
- Runtimes
- not in the notes
Where this comes from
Deployment tiers and runtimes as named in the notes. Footprint is the notes' figure, not a measurement by AURION.
Indonesia
- Indonesian support
- not stated
- Regional languages
- not in the notes
- Jakarta hosting
- unknown
- Languages
- not in the notes
Where this comes from
Indonesia fields are carried on every model; unknown is an allowed value.
Benchmark Results
The notes record no benchmark result for this model.
Lineage
The notes record no lineage for this model.
Industry Use Cases
No industry use case links this model.
Links
Developersnone recorded
ModelGeneformerscientific
Use CasesMedical Image SegmentationHealthcareUse cases of models in the same R&D topic; none is recorded for this model itself.
Who Runs Itnone recordedDeployments of these use cases; none names this model.
Sources
- huggingface.co/ctheodoris/Geneformer https://huggingface.co/ctheodoris/Geneformer
- catalog.ngc.nvidia.com/orgs/nvidia/teams/clara/models/geneformer_100m https://catalog.ngc.nvidia.com/orgs/nvidia/teams/clara/models/geneformer_100m
To cite this page: Project AURION, AI Use-Cases Research & Innovation, "Geneformer", https://aurion.semai.id/models/geneformer/, records of October 2026.